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Blog, Paper, Privacy protection

An Extensible Evaluation Framework Applied to Clinical Text Deidentification Natural Language Processing Tools: Multisystem and Multicorpus Study

May 29, 20240Comments
Paul Heider, Stéphane Meystre J Med Internet Res 2024;26:e55676, doi: 10.2196/55676, PMID: 38805692 Available at: https://www.jmir.org/2024/1/e55676
Blog, Clinical NLP, Paper

Large language models for biomedicine: foundations, opportunities, challenges, and best practices

April 25, 20240Comments
Satya Sahoo, Joseph Plasek, Hua Xu, Ozlem Uzuner, Trevor Cohen, Meliha Yetisgen, Hongfang Liu, Stéphane Meystre , Yanshan Wang J Am Med Inform Assoc, published…
Blog, CRI, Paper

Piloting an automated clinical trial eligibility surveillance and provider alert system based on artificial intelligence and standard data models

April 12, 20230Comments
Stéphane M Meystre, Paul M Heider, Andrew Cates, Grace Bastian, Tara Pittman, Stephanie Gentilin, Teresa J Kelechi BMC Medical Research Methodology volume 23, Article number: 88 (2023), https://doi.org/10.1186/s12874-023-01916-6 Available at:…
Blog, Clinical NLP, Paper, Reuse for CDS

Natural Language Processing Enabling COVID-19 Predictive Analytics to Support Data-Driven Patient Advising and Pooled Testing

October 8, 20210Comments
Stéphane M Meystre, Paul M Heider, Youngjun Kim, Matthew Davis, Jihad Obeid, James Madory, Alexander V Alekseyenko J Am Med Inform Assoc. Volume 29, Issue 1, January 2022, Pages 12–21, https://doi.org/10.1093/jamia/ocab186. Available…
Blog, Clinical NLP, Paper

A Hybrid Model for Family History Information Identification and Relation Extraction: Development and Evaluation of an End-to-End Information Extraction System

April 30, 20210Comments
Youngjun Kim, Paul M Heider, Isabel Rh Lally, and Stéphane M Meystre JMIR Med Inform. 2021 Apr 22;9(4):e22797. Available at: https://pubmed.ncbi.nlm.nih.gov/33885370/ and at: https://medinform.jmir.org/2021/4/e22797/
Blog, Paper, Privacy protection

Data Science Best Paper Award Winner

March 22, 20200Comments
Our paper on "A Comparative Analysis of Speed and Accuracy for Three Off-the-Shelf De-Identification Tools" has been awarded the Data Science Best Paper Award at…
Blog, Paper

Multiple publications at the Medinfo 2019 conference

September 3, 20190Comments
Paul Heider and Stephane Meystre presented multiple publications at the international Medinfo 2019 conference in Lyon, France: Kim, Y., & Meystre, S. M. (2019). A…
Blog, Paper, Privacy protection

Ensemble-based Methods to Improve De-identification of Electronic Health Record Narratives

November 14, 20180Comments
Kim, Y., Heider, P., & Meystre, S. M. (2018). Ensemble-based Methods to Improve De-identification of Electronic Health Record Narratives. AMIA Annu Symp Proc. 663–672.
Blog, Paper, Reuse for QI

Automating Quality Measures for Heart Failure Using Natural Language Processing: A Descriptive Study in the Department of Veterans Affairs

January 16, 20180Comments
Garvin, J. H., Kim, Y., Gobbel, G. T., Matheny, M. E., Redd, A., Bray, B. E., et al. (2018). Automating Quality Measures for Heart Failure…
Blog, Clinical NLP, Paper

Exploiting Unlabeled Texts with Clustering-based Instance Selection for Medical Relation Classification

November 15, 20170Comments
Kim, Y., Riloff, E., & Meystre, S. M. (2017). Exploiting Unlabeled Texts with Clustering-based Instance Selection for Medical Relation Classification (pp. 1060–1069). Presented at the…

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